B C E F I L M N O R S W

B

BioSeq - Class in blrevcomp

Biological sequence

BioSeq() - Constructor for class blrevcomp.BioSeq

BioSeq.Nuchar - Class in blrevcomp

Nuchar.INuc.get() returns the character to be written if the sequence is being printed from the input strand.
Nuchar.CNuc.get() returns the character to be written if the sequence is being printed from the complementary strand.
The case of nucleotides in the input sequence is preserved in the output sequence.

BioSeq.Nuchar() - Constructor for class blrevcomp.BioSeq.Nuchar

blrevcomp - package blrevcomp

BR - Variable in class blrevcomp.BufferedTextInputFile

BufferedTextInputFile - Class in blrevcomp

Types and methods for safely opening or closing an input file for reading lines of text.

BufferedTextInputFile() - Constructor for class blrevcomp.BufferedTextInputFile

BufferedTextOutputFile - Class in blrevcomp

Types and methods for safely opening or closing an output file for writing lines of text.

BufferedTextOutputFile() - Constructor for class blrevcomp.BufferedTextOutputFile

BW - Variable in class blrevcomp.BufferedTextOutputFile