Uses of Class
org.biolegato.gdesupport.files.DataFormat

Packages that use DataFormat

org.biolegato.gdesupport.canvas
org.biolegato.gdesupport.files

Uses of DataFormat in org.biolegato.gdesupport.canvas

Methods in org.biolegato.gdesupport.canvas with parameters of type DataFormat

void	GDECanvasObject.writeOut(DataFormat format, java.lang.Appendable dest)
void	GDEList.writeOut(DataFormat format, java.lang.Appendable dest)
void	GDETextArea.writeOut(DataFormat format, java.lang.Appendable dest) Writes the selected sequences out to an appendable object

Uses of DataFormat in org.biolegato.gdesupport.files

Subclasses of DataFormat in org.biolegato.gdesupport.files

class	FastAFile FastA file format parser.
class	GDEFile This class acts as a parser/translator for standard GDE files.
class	GDEFlatfile This class acts as a parser/translator for GDE flat files.
class	GenBankFile2008 This class acts as a parser/translator for GenBank files (using the file specification current to 2008).

Fields in org.biolegato.gdesupport.files declared as DataFormat

static DataFormat	DataFormat.FASTA
static DataFormat[]	DataFormat.FORMAT_LIST The list of available file formats
static DataFormat	DataFormat.GDEFILE
static DataFormat	DataFormat.GDEFLAT
static DataFormat	DataFormat.GENBANK

Methods in org.biolegato.gdesupport.files that return DataFormat

static DataFormat	DataFormat.autodetect(java.io.BufferedReader data) Used to auto-detect file formats.
static DataFormat	DataFormat.getFormat(java.lang.String hashname) /** Finds the filetype that corresponds to the given hashname (null if not successful).

Methods in org.biolegato.gdesupport.files with parameters of type DataFormat

static void	DataFormat.readFile(Dataset datamodel, DataFormat format, java.io.File file) Reads a file into the canvas
static void	DataFormat.writeAll(Dataset datamodel, DataFormat format, java.io.File file) Writes a list of sequences to a file.